Fire and competition in Australian heath: a conceptual model and field investigations

Abstract. We describe a model of heath vegetation, in which species were classified into five functional groups based on characteristics of their propagule pools, post-fire growth, timing and mode of reproduction and competitive status. The model assumes no recruitment without fire and a simple competitive hierarchy based on vertical stature. A critical feature of the model is an initial post-fire window of 5–6 yr in which competition from overstorey species on understorey species is reduced. Understorey functional groups differ in their ability to exploit this window. In the field, we tested five predictions derived from the model: (a) overall species richness of understorey varies inversely with overstorey density as a result of a trend in richness of woody species, but not in herbaceous species; (b) where an overstorey was present in the previous fire interval, post-fire population density is reduced in a functional group of understorey serotinous resprouting shrubs, but not in a group of understorey obligate-seeding shrubs with soil seed banks; (c) in understorey serotinous resprouting shrubs, post-fire regrowth in resprouting individuals is adversely affected by the presence of an overstorey in the preceding fire interval; (d) in understorey serotinous resprouting shrubs, levels of pre-fire propagules are lower in the presence of an overstorey, reducing the density of post-fire recruits; and (e) in understorey serotinous resprouting shrubs, recruitment relative to the pre-fire population is unaffected by overstorey species within the window of reduced competition. Of these, three tests (a,b,d) supported the model, one (e) may support the model, but the results were inconclusive and one (c) did not support the model. Limitations and further applications of the model are discussed. Our results suggest that maintenance of high densities of overstorey populations is in conflict with conservation of some understorey species. Models of the type we propose will help identify and resolve such conflicts and promote the judicious use of fire to maintain full species diversity of plant communities.     

Divergence pattern and selective mode in protein evolution: The example of vertebrate myoglobins and hemoglobin chains

Summary The evolutionary relation of vertebrate myoglobin and the hemoglobin chains including the agnathan hemoglobin chain is investigated on the basis of a new view of amino acid changes that is developed by canonical discriminant analysis of amino acid residues at individual sites. In contrast to the clear discrimination of amino acid residues between myoglobin, hemoglobin a chain, and hemoglobin chain in warm-blood vertebrates, the three types of globins in the lower class of vertebrates show so much variation that they are not well discriminated. This is seen particularly at the sites that are ascertained in mammals to carry the amino acid residues participating in stabilizing the monomeric structure in myoglobin and the residues forming the subunit contacts in hemoglobin. At these sites, agnathan hemoglobin chains are evaluated to be intermediate between the myoglobin and hemoglobin chains of gnathostomes. The variation in the phylogenetically lower class of globins is also seen in the internal region; there the amino acid residues of myoglobin and hemoglobin chains in the phylogenetically higher class exhibit an example of parallel evolution at the molecular level. New quantities, the distance of sequence property between discriminated groups and the variation within each group, are derived from the values of discriminant functions along the peptide chain, and this set of quantities simply describes an overall feature of globins such that the distinction between the three types of globins has been clearer as the vertebrates have evolved to become jawed, landed, and warm-blooded. This result strongly suggests that the functional constraint on the amino acid sequence of a protein is changed by living conditions and that severe conditions constitute a driving force that creates a distinctive protein from a less-constrained protein.Offprint requests to: J. Otsuka     

开垦对阿拉善荒漠啮齿动物群落功能多样性的影响

开垦会导致荒漠化的加剧,并对动物群落产生严重的影响。而功能多样性恰恰能体现环境或干扰胁迫导致的群落结构差异。但有关啮齿动物群落功能多样性的研究并不多见,为此,我们在2018至2020年的4月、7月和10月利用铗日法对开垦区和未开垦区的啮齿动物群落进行调查,选择并量化了与其营养、生活史、生理、形态及活动节律等相关的5个功能性状,以探讨开垦对啮齿动物群落组成的影响,以及性状组成和功能多样性变化。研究结果表明：(1)开垦区群落的丰富度指数、多样性指数和均匀度指数均低于未开垦区,开垦改变了啮齿动物群落性状组成;(2)阿拉善荒漠啮齿动物群落组成与蛰眠、繁殖周期和食性等功能性状显著相关;(3)开垦区春、秋季群落功能丰富度和功能均匀度高于未开垦区,各季节群落功能离散度显著高于未开垦区;而未开垦区夏季群落功能丰富度高于开垦区,秋季群落功能均匀度高于开垦区;(4)开垦区和未开垦区群落功能丰富度最高值均出现在夏季,二者在不同季节间差异较大;开垦区群落功能均匀度最高值出现在春季、功能离散度最高值出现在秋季,二者在季节间差异均较小;未开垦群落功能均匀度最高值出现在秋季、功能离散度最高值出现在夏季,二者在季节间差异均较大。上述结果说明,阿拉善荒漠区啮齿动物群落功能多样性变化与土地开垦和季节相关联,开垦会从啮齿动物群落的生态空间利用程度、资源利用、种间竞争及生态位等方面影响群落功能多样性。     

浙江古田山亚热带常绿阔叶林叶衰老物候影响因子研究

该文选取浙江省古田山亚热带常绿阔叶林72种木本植物,探究气候因素、系统发育关系和功能性状对亚热带常绿阔叶林叶衰老物候的影响。结果表明,叶变色期在9—12月,落叶期在10—12月。每月落叶物种数与月均温、月均降水量和月均日照时数没有显著相关性,每月叶变色物种数与月均温和月均日照时数呈弱相关;落叶性对叶变色期和落叶期具有显著影响;植物间系统发育关系对叶变色期和落叶期没有显著影响。因此,生物和非生物因子都会影响常绿阔叶树种的叶衰老,这对于提高秋季物候预测模型具有重要价值。     

腰背肌康复训练联合脊柱微调手法对腰椎间盘突出症患者功能康复、血液流变学和生活质量的影响

摘要 目的：探讨腰背肌康复训练联合脊柱微调手法对腰椎间盘突出症（LDH）患者功能康复、血液流变学和生活质量的影响。方法：采用随机数字表法,将我院2020年3月~2022年3月期间收治的120例LDH患者分为对照组（60例,腰背肌康复训练）和观察组（60例,腰背肌康复训练联合脊柱微调手法）。观察两组患者临床疗效、功能康复效果、血液流变学和生活质量。结果：观察组的临床总有效率高于对照组（P<0.05）。观察组干预4周后日本骨科协会腰椎功能（JOA）评分高于对照组,Oswestry功能障碍指数（ODI）、视觉模拟评分法（VAS）评分低于对照组（P<0.05）。观察组干预4周后腰部屈曲腰部活动范围（ROM）、伸展ROM、测屈ROM和屈肌肌力、伸肌肌力高于对照组（P<0.05）。观察组干预4周后全血高切黏度、全血低切黏度、红细胞聚集指数低于对照组（P<0.05）。观察组干预4周后躯体功能、精神健康、活力、躯体疼痛、社会功能、总体健康、情感职能、生理机能维度评分高于对照组（P<0.05）。结论：腰背肌康复训练联合脊柱微调手法用于LDH患者干预中,可改善血液流变学,促进功能康复,有利于患者生活质量的提高。     

Evidence for constraint on species coexistence in vegetation of the Park Grass experiment

Repeated patterns, of a type that would be expected to result from limitations to species coexistence (i.e. assembly rules) were sought in the Park Grass experiment. This classical grassland experiment was sampled in two years, using replicated biomass samples. Variance in a number of measures was examined, and compared to the variance expected under appropriate null models, the latter based on assumptions of no interactions between species. In each case, an assembly rule would result in low variance. Examining variance in species richness between quadrats within a treatment, there was no indication of constraint on species co-occurrences; variance in richness was actually greater than expected under the null model, attributable to environmental variation or perhaps positive interactions between species. However, there was control on biomass, evidenced by variance in total biomass (i.e. over all species) within a treatment being significantly lower than expected under the null model. There was no indication of community structure based on guilds (i.e. functional types). Although there was in 1991 some, non-significant, indication of a constant proportion of species from the legume guild, there was no sign of such an effect in 1992. Searches for intrinsic guilds failed to converge. There was no indication at all of constancy in the proportional representation of guilds by biomass. Thus, there is good evidence for competitive control on plant growth, but none for control of species occurrences. There is no convincing evidence for guild structure in this community at the scale sampled. Possible conflict is discussed between the existence of evidence for temporal stability but the absence of evidence for spatial uniformity. It is concluded that most of the mechanisms proposed for temporal stability will not necessarily lead to control on spatial variation. For many mechanisms, this would depend on the spatial scale examined.     

Exploiting the complete yeast genome sequence

The completion of the genome sequence of the budding yeast Saccharomyces cerevisiae marks the dawn of an exciting new era in eukaryotic biology that will bring with it a new understanding of yeast, other model organisms, and human beings. This body of sequence data benefits yeast researchers by obviating the need for piecemeal sequencing of genes, and allows researchers working with other organisms to tap into experimental advantages inherent in the yeast system and learn from functionally characterized yeast gene products which are their proteins of interest. In addition, the yeast post-genome sequence era is serving as a testing ground for powerful new technologies, and proven experimental approaches are being applied for the first time in a comprehensive fashion on a complete eukaryotic gene repertoire.     

Optimal foraging by a suspension-feeding copepod: responses to short-term and seasonal variation in food resources

Laboratory radioisotope experiments were used to investigate the effects of phytoplankton seasonal succession on the selectivity and clearance rates of a suspension-feeding copepod in two Indiana lakes. Responses to particle size and quality were tested by allowing adult female Diaptomus birgei feeding in natural seston to select between a small (6×7 m) flagellate (Chlamydomonas reinhardii) and a large, poor quality food (heat-killed Carteria olivieri, 22×25 m). Short-term responses were tested in one lake by additional treatments in which copepods were acclimated for 5–6 h in filtered lake water (starved) or natural seston with added Chlamydomonas (enriched). Copepods from both lakes fed selectively on the small live flagellate during the spring bloom of edible phytoplankton but fed selectively on the larger, poor quality particle during the clear water phase when food was scarce. These results are interpreted as an interaction between the concentration-dependent selectivity for high quality foods predicted by optimal diet theory and a perceptual bias for large-sized particles. Selectivity for high-quality food was intermediate and clearance rates were depressed when total phytoplankton abundance was high but dominated by filamentous cyanobacteria. In each experiment copepods also responded to the short-term manipulations by exhibiting weaker discrimination against the poor quality particle in the starvation treatment and stronger discrimination in the enriched treatment. A two-way mixed model ANOVA revealed substantial short term (37%) and seasonal (53%) components to the total variance in selectivity. Clearance rates were also influenced by both phytoplankton succession and the short-term resource manipulations. As expected, clearance rates on the poor quality food were more sensitive to the abundance of alternative foods. These results show how the feeding behavior of a freshwater copepod is modulated by both seasonal and short-term variation in natural food.     

Interpopulation variation in prey use and feeding biomechanics in Caribbean triggerfishes

The relationships between prey utilization and jaw biomechanics were explored in two Caribbean populations (La Parguera and Mona Island) of four trigger-fishes. The volumetric contribution of major prey types and six biomechanical features of the jaws that characterize biting strength were contrasted between populations. At Mona, Xanthichthys ringens ate 45% benthic organisms, whereas conspecifics at La Parguera fed exclusively on plankton. Balistes vetula at Mona consumed 63% soft and nonelusive invertebrates, in contrast to their La Parguera conspecifics, which consumed 62% hard prey. Differences in diet between populations were associated with differences in jaw biomechanics. Xanthichthys at Mona had jaw muscles, bones, and closing-lever ratios larger than those of fish at La Parguera, indicating a stronger bite. Balistes at Mona had 50% smaller jaw bones, muscles, and closing-lever ratios than their La Parguera conspecifics, indicating a weaker but swifter bite. Melichthys niger and Cantherhines macrocerus ate similar prey at the two locations and showed little difference in trophic anatomy. We hypothesize that the interpopulation differences in morphology are induced by the activities of feeding on different prey and enhance the feeding ability of fishes for locally dominant prey. Plasticity of the feeding mechanism may be a widespread attribute of fish feeding systems that promotes the ability of species to occupy multiple habitat types successfully.     

Patterns of nucleotide substitutions inferred from the phylogenies of the class I major histocompatibility complex genes

Summary Patterns of nucleotide substitutions in human major histocompatibility complex (MHC) class I genes were estimated by using phylogenetic trees of DNA sequences. The pattern is defined as a set of 12 parameters, each of which represents the relative frequency of substitutions from a particular nucleotide to another. The pattern at the antigen recognition sites (ARS) in functional MHC genes was remarkably different from that at the remaining coding region (non-ARS). In particular, the proportion of transitions among all the nucleotide substitutions (P _s) was extremely low at the third codon positions of ARS. In the HLA-A genes, P _s at the third codon positions was only 6% in ARS, whereas it was 69% in non-ARS. In HLA-B, the corresponding values were 30% in ARS and 80% in non-ARS, respectively. On the other hand, P _s in a class I pseudogene (HLA-H) was 57%, which was in good agreement with P _s in other pseudogenes. Because pseudogenes are selectively neutral, the pattern in pseudogenes is regarded as the pattern of spontaneous substitution mutations. In general, the pattern in functional genes that are subject to selective forces deviates from the pattern in pseudogenes. At the third codon positions in coding regions, transitions scarcely cause amino acid replacements, whereas about half of transversions do cause replacements. Accordingly, P _s at the third codon positions decreases if amino acid replacements are accelerated by natural selection but increases if amino acids are conserved by functional constraint. Our observations imply that the ARS region is subject to natural selection favoring amino acid replacements, whereas the non-ARS region is subject to functional constraint. Offprint requests to: T. Gojobori